Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790594.1_cds_XP_016502428.1_1518
CDS Infomation

[gene=LOC107820625] [db_xref=GeneID:107820625] [protein=oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917] [protein_id=XP_016502428.1] [location=join(12137..12969,13204..13831)] [gbkey=CDS]
Sequence

ATGATTAGTGCTTATTATGCTGGAGGCTCTATTTTTGCCTTCCCAAACATGCTGAGATCA
ACGTTCACTCCTATATTCACGGCCTTTCCCTCTAAGGCCAAACACCGCAACTATTCCAAC
ACAATTATCACTGCAATATCAAAACCCCCACAAACTGTTCGACAAAATGCCGCAGTAGAA
AATACATTCCTGCAACAGCATAACCCAACGTCAGCTTACGTTCACCTCCCTTTCTGCCGA
AGACGCTGTCACTACTGCGACTTCCCTATCGTCGCTCTCGGCTCATCTTCACCTCAGGCT
GATGACGACCCGCGAATTCTTAACTACATTGATTTTCTCTGCAGAGAAATTAAAGCCACC
CTAACACCTTCTAACCACAAGTCACCTCTCGAAACTGTATTTTTTGGTGGAGGGACACCT
TCACTTGTGCCACCAAGATTAGTATCTGTAGTCCTGGACACACTGGACTCTAAATTTGGT
GTGTGTTCCGATGCTGAAATTTCAATAGAAATGGACCCTGGTACATTTGATGCTGCAAAG
TTGAAAGATTTGATGAAGTTGGGTGTTAATAGAGTTTCTCTAGGAGTTCAGGCATTCCAG
GAGGAATTGCTTAAGAGTTGTGGGAGAGCTCATGGCGTACAGGAAATTCATGAGGCTATT
GACATTGTTGGATCATGTGGTGTTGAGAATTGGAGTGTGGACCTTATATCTTCACTTCCT
CATCAGAAGCCACATATGTGGGAACAAAGCTTGAGCCTCACCATTCAAGCAAAGCCTACA
CATGTTTCAGTTTACGATTTACAAGTTGAACAAGATACGAAGTTTGGATCTTTATATACA
GCTGGAGAATTCCCTCTGCCTTCTGAAAATCAATCTGCTGAGTTTTACAAAATGGCCTCT
GAAATGCTAAGAAATGCTGGTTATGAGCACTATGAGATAAGTAGCTACTGCAAAAGTGGT
TATCAATGCAAGCACAATTATACATACTGGATAAACAAATCTTTTTACGCTTTTGGACTG
GGGTCAGCCAGTTATCTTAATGGAGTAAGGTTTTCAAGGCCAAGGAAGCTGAAAGATTAC
ATGGGTTATGTGCAAAATTTGGAGAATGGACTAGTGAATTGTTGCCAGGACAGTAAAGTA
GACGCTCAAGACATAGCGACGGATGTTGTTATGCTGTCTCTGAGAACTGCTAGAGGGATA
GATTTGAAGTCATTTAGCAAAGCTTTTGGAAGCTCAACTGTTCTTTCCCTTTGTGAGGTC
TATAAGCCTCATATTGAGAGTGGGCATGTTGTCTGTTTGGATGAGCAGAGGAGGAAAATC
GACGCAGAAGAATTCAGATCTTTGTTATCTGAAGGGGACAAGGTTAATGAGGTATTGGCA
TATATCAGGCTTAGTGACCCTGATGGTTTCCTGTTATCTAATGAGTTAATATCCCTCGCG
TTCAATGTGTTAGCTCCATAA

Peptide Sequence

PEP ID

XP_016502428.1
PEP Infomation

PREDICTED: oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 [Nicotiana tabacum]
Sequence

MISAYYAGGSIFAFPNMLRSTFTPIFTAFPSKAKHRNYSNTIITAISKPPQTVRQNAAVE
NTFLQQHNPTSAYVHLPFCRRRCHYCDFPIVALGSSSPQADDDPRILNYIDFLCREIKAT
LTPSNHKSPLETVFFGGGTPSLVPPRLVSVVLDTLDSKFGVCSDAEISIEMDPGTFDAAK
LKDLMKLGVNRVSLGVQAFQEELLKSCGRAHGVQEIHEAIDIVGSCGVENWSVDLISSLP
HQKPHMWEQSLSLTIQAKPTHVSVYDLQVEQDTKFGSLYTAGEFPLPSENQSAEFYKMAS
EMLRNAGYEHYEISSYCKSGYQCKHNYTYWINKSFYAFGLGSASYLNGVRFSRPRKLKDY
MGYVQNLENGLVNCCQDSKVDAQDIATDVVMLSLRTARGIDLKSFSKAFGSSTVLSLCEV
YKPHIESGHVVCLDEQRRKIDAEEFRSLLSEGDKVNEVLAYIRLSDPDGFLLSNELISLA
FNVLAP

Transcript Sequence

Gene sequence data has not been registered.